Since the 1850s, plowing and clear-cutting in modern agriculture have increased how fast soil erodes in the Upper Mississippi River Valley. Across the globe, farming strips soil up to 100 times faster than natural processes. It also removes farmable land and clogs waterways, threatening long-term environmental sustainability. However, scientists in the past have struggled to separate the effects of land-use changes from the transition out of the last ice age over the past 20,000 years. 

To determine whether current farming practices are sustainable, researchers from Minnesota recently measured the speed at which soil eroded during the ice age transition and compared it with modern agricultural erosion. They focused on the Trout Creek tributary of the Mississippi River. This tributary has 2 step-like formations, or terraces, on its bank that represent past floodplains before the river eroded to its current level. 

The oldest, upper terrace is about 14 meters (50 feet) above the lower terrace, which is about 8 meters (26 feet) above the modern floodplain. Scientists studying nearby areas have suggested that the terraces contain sediment from the last ice age, 20,000 years ago, referred to as the Last Glacial Maximum, to today. 

In the upper terrace, the researchers pushed an empty cylinder into the ground, like a straw into a layer cake, to collect a cylindrical sample of sediments about 4 centimeters (1.5 inches) wide and 6 meters (20 feet) deep, called a sediment core. They collected slices of this core from 2 meters (6 feet) and 6 meters (20 feet) to find the terrace’s age. 

Some grains in the sediment trap electrons while buried and release them when exposed to light. So the team shone light on the sediment slices to stimulate these electrons and measure the intensity of light emitted, known as their optically stimulated luminescence. Brighter light emissions indicate the sediment is older and was buried for a longer period of time. Using this method, they confirmed that the deep sediment slice was 22,000 years old, and the shallow sediment slice was 20,000 years old, dating the terrace back to the Last Glacial Maximum.

Next, the team drilled into the upper terrace with an auger to collect 25-centimeter (10-inch) wide plastic tubes of sediment. They pulled 4 samples from 0 to 2 meters (0 to 6 feet), and 1 sample from 6 meters (20 feet) deep. They explained that minerals in the sediment called quartz produce the radioactive form of the element beryllium, known as ¹⁰Be, when exposed to the Sun, so low ¹⁰Be means the sediment was buried quickly and had little sun exposure. The team measured the concentration of ¹⁰Be in each sediment sample and used an online calculator to estimate how quickly it eroded. The researchers calculated that during the Last Glacial Maximum, 0.073 millimeters (0.003 inches) of surface sediment were removed per year.

The researchers collected similar samples from the lower terrace and used optically stimulated luminescence to determine that it was between 22,000 and 14,000 years old. This terrace was the floodplain during the transition out of the Last Glacial Maximum, or deglacial period, where temperatures warmed and permafrost retreated. They measured the concentration of ¹⁰Be in samples from this terrace and determined that 0.049 millimeters (0.002 inches) of surface sediment were removed per year. 

Finally, the researchers measured ¹⁰Be in a sediment sample from the modern floodplain, deposited between 14,00 years ago and today. They found that the sediment had eroded 0.053 millimeters (0.002 inches) per year during that interval, at a rate slower than it had during the glacial period, but similar to the deglacial period. 

The researchers compared their findings to the average soil loss caused by modern agriculture, as reported by 4 previous scientists studying the area. They saw that modern farming removes an average of 0.60 millimeters (0.02 inches) of soil per year, which is 8 to 12 times greater than all the natural erosion rates they calculated. 

They concluded that the recent spike in soil loss from agriculture greatly exceeds that caused by the largest natural climate transition in recent Earth history. Human-driven erosion shows an upward “hockey stick” trend like the one seen in global temperatures, suggesting that similar trends could exist throughout Earth systems. The team concluded that modern agricultural practices aren’t currently sustainable. While measures like native plant reintroduction can help curb this trend, more research is required to determine how best to limit long-term erosion.

The post Is modern farming sustainable? appeared first on Sciworthy.

Brown rot is a common fungal disease in the Southeastern United States that affects stone fruits like peaches, cherries, and plums. Monilinia fructicola is a tan, fuzzy fungus that grows on tree flowers, twigs, and fruit, and is the most common cause of brown rot. Once brown rot infects a tree, the damage is irreversible, causing significant crop losses in commercial orchards. Farmers try to control the spread of M. fructicola by applying chemical sprays, called fungicides, to fruit trees in the spring.

In M. fructicola, a biosynthesis gene named MfCYP51 encodes a major protein critical to the fungi’s survival. Certain fungicides, called demethylation inhibitor (DMI) fungicides, stop M. fructicola from growing by targeting this protein. Over the last 20 years, DMI fungicides have become less effective against brown rot as M. fructicola becomes more resistant. 

Living microorganisms and their metabolites can control fungal diseases as an alternative to chemical fungicides, known as biofungicides. Many bacteria produce compounds like hydrogen cyanide and pyrrolnitrin that damage fungal cells. However, scientists have not found a biofungicide suitable for commercial production.​ A group of researchers at Clemson University in the USA and Huazhong Agricultural University in China set out to test whether the soil bacteria Pseudomonas chlororaphis and Bacillus subtilis could be effective biofungicides against brown rot. 

The researchers performed an incubation experiment to analyze how the fungal cells make their critical protein from the MfCYP51 gene, a process called gene expression, under different fungicide treatments. They used 3 M. fructicola strains sensitive to traditional DMI fungicides and 3 resistant strains. They tested these with 5 different fungicide treatments: a DMI fungicide, a mixture of P. chlororaphis metabolites, a mixture of living B. subtilis cells, a DMI fungicide + P. chlororaphis metabolites, and a DMI fungicide +  B. subtilis cells. They also set up a control treatment with sterile water instead of fungicide.  

After 6 hours, the researchers extracted the molecule that measures gene expression, called RNA, from the fungi. They found that both the P. chlororaphis treatment and the DMI fungicide + P. chlororaphis treatment substantially reduced MfCYP51 expression in both the sensitive and resistant isolates compared to the controls. In contrast, the DMI fungicide, B. subtilis, and DMI fungicide + B. subtilis treatments increased MfCYP51 expression in the resistant isolates. The researchers concluded that P. chlororaphis has a unique ability to reduce gene expression, unlike other biofungicides.

​To further investigate how the biofungicide treatments work, the team tested whether P. chlororaphis and B. subtilis produced the anti-fungal metabolite pyrrolnitrin. They added 1 milliliter of each treatment to a machine that separates and identifies liquid compounds using high pressure, called a high-performance liquid chromatograph. They found that the P. chlororaphis treatment contained pyrrolnitrin, so they hypothesized that it was responsible for reducing gene expression.

Additionally, the researchers tested their 5 treatments on brown rot in fruit. For each treatment, they took 10 Gala apples, washed and sterilized their surfaces, and sprayed them with the fungicides. After 24 hours, they poked holes in the apples with toothpicks and added 20 microliters of liquid containing M. fructicola cells to the poked holes. They placed the apples in a humid chamber for 5 days and measured the number and size of brown rot spots that developed on their surfaces. 

Despite decreasing MfCYP51 expression, ​the researchers found that P. chlororaphis treatment alone didn’t reduce brown rot disease compared to the control, but the DMI fungicide and B. subtilis treatments did. The mixed treatments of DMI fungicide + P. chlororaphis and DMI fungicide + B. subtilis both reduced brown rot disease compared to the control, but only the DMI fungicide + P. chlororaphis treatment prevented it. 

​The researchers concluded that although biofungicides may not be fully effective on their own, commercializing them could allow farmers to use less DMI fungicide. They explained that scaling back the use of DMI fungicides would slow M. fructicola resistance. Finally, they proposed that future researchers test biofungicide mixtures containing pyrrolnitrin in the field to observe real-world effects on stone fruit trees.

The post Using bacteria to fight fungal brown rot appeared first on Sciworthy.

New research suggests dusty leaves can feed plants in nutrient-poor ecosystems.