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Denisovans in southwestern China reveal their ancient subsistence strategies

The Denisovans, the enigmatic archaic human relatives first identified from a finger bone and a handful of teeth in a Siberian cave, have long been known almost exclusively through their DNA. Now, a landmark study published in Nature has pulled back the curtain on how these ancient hominins actually lived — what they ate, how they hunted, what tools they made, and the environments they braved — through an extraordinary assemblage of fossils and artefacts from Bianfu Cave in Yunnan Province, southwestern China. The findings paint the most detailed portrait to date of Denisovan biology, behaviour and ecology in eastern Asia, and suggest that these vanished people left a deep genetic and cultural imprint on later populations across Southeast Asia and Oceania.

The research team, led by Qingfeng Ruan, Hua Li and Song Xing and their colleagues, conducted a comprehensive analysis of hominin fossils and the associated archaeological remains recovered from Bianfu Cave. The hominin fossils themselves date to roughly 167,000 to 134,000 years ago, placing them firmly in the Middle Pleistocene. But the cultural sequence preserved in the cave’s sediments is far longer, stretching from approximately 190,000 years ago to about 70,000 years ago. That span — some 120,000 years of continuous or near-continuous occupation — makes Bianfu Cave one of the longest cultural records that can most parsimoniously be attributed to Denisovans anywhere in the world.

The Denisovan identity of the fossils was established through two independent and technically demanding lines of evidence. The first involved analysis of the enamel–dentine junction, the internal boundary between the enamel cap and the underlying dentine of the teeth. This three-dimensional morphological interface acts something like a fingerprint of evolutionary relationships, revealing diagnostic traits of the tooth’s internal architecture that are invisible from the outside but characteristic of particular hominin lineages. The second line of evidence came from palaeoproteomics, the recovery and identification of ancient proteins preserved within fossilized tissues. Because proteins are far more abundant and durable than DNA, they can survive in warm, humid environments like those of southern China, where genetic material degrades rapidly. Sequencing these ancient proteins allowed the researchers to place the Bianfu hominins on the Denisovan branch of the human family tree with confidence.

The fossil collection itself is remarkable. It includes four teeth that substantially expand the known range of dental variation within the Denisovan lineage — a critical contribution, since Denisovans were previously represented by a very small number of dental specimens, making it difficult to gauge how variable their teeth could be. The new fossils also include two cranial fragments and a radius, a forearm bone, providing rare glimpses of Denisovan skull and postcranial anatomy that were previously almost entirely unknown. Together, these remains transform Denisovans from a genome and a scatter of isolated teeth into a population with recognizable skeletal biology.

Beyond the fossils, the archaeological record from Bianfu Cave offers something equally precious: a window into Denisovan daily life. The researchers reconstructed the ancient environment using faunal remains and pollen preserved in the cave deposits. These records indicate that across Marine Isotope Stages 6 through 4 — a period encompassing major glacial–interglacial climatic swings between roughly 190,000 and 57,000 years ago — the landscape around the cave was dominated by coniferous forest or a mosaic of forest and steppe. This was a cool, variable environment that Denisovans exploited successfully across tens of thousands of years, demonstrating a resilience to climatic change that adds to growing evidence of their adaptability, from the high altitudes of the Tibetan Plateau to the subtropical latitudes of mainland Southeast Asia.

The subsistence evidence is particularly striking. Analysis of the animal bones from the cave shows that its inhabitants practised specialized hunting focused on medium- to large-bodied prey. This was not opportunistic scavenging but a sustained, targeted hunting strategy — one that would have required knowledge of animal behaviour, coordinated effort and effective weaponry. Specialized big-game hunting of this kind has often been associated with modern humans and late Neanderthals in western Eurasia, so finding it in a Denisovan context more than 150,000 years ago dramatically narrows the perceived behavioural gap between these archaic lineages and our own species.

Yet the technological strategy documented at Bianfu Cave is, at first glance, surprisingly simple. The stone tool assemblage is characterized by expedient core reduction and tool production — that is, the inhabitants struck flakes from cores as needed, used them, and discarded them, rather than investing in carefully shaped, curated tools that were carried, maintained and resharpened over time. Alongside this, the Denisovans of Bianfu Cave made pervasive use of unmodified bones, employing skeletal elements of their prey directly as tools without altering them beforehand.

Taken together, the researchers interpret this pattern as an adaptive system that prioritized the exploitation of what they call object affordance — the inherent functional possibilities already present in a raw material or object — over intensive tool manufacture. A suitably shaped bone fragment could serve as a hammer, a digging implement or a scraping tool with little or no modification; a sharp flake struck from a convenient core could cut and butcher without further refinement. In the rich, resource-diverse environments of subtropical southwestern China, where raw materials and animal resources were plentiful, such a flexible, low-investment strategy may have been not a sign of simplicity but a highly efficient way of life. It suggests that Denisovans measured success not by the sophistication of their toolkit but by how skilfully they read and exploited the opportunities their landscape provided.

This behavioural portrait gains added significance when set against the wider geography of Denisovan presence. Over the past decade and a half, Denisovans have been documented across a staggering range: from the original genomic discoveries in the Altai Mountains of Siberia, first reported in 2010, to the mandible from the Tibetan Plateau described in 2019, Denisovan DNA recovered from sediments at Baishiya Karst Cave in 2020, a molar from the Annamite Chain of northern Laos announced in 2022, a male Denisovan mandible from Pleistocene Taiwan reported in 2025, and proteomic identification of the 146,000-year-old Harbin cranium, also in 2025. Bianfu Cave now anchors this story firmly in southwestern China, a region long suspected to have been a Denisovan heartland and a critical corridor for hominin movements between mainland Asia and Southeast Asia.

The study’s authors argue that the region’s Denisovans point to a substantial genetic and cultural legacy in later human populations. Modern populations in Southeast Asia and Oceania carry the highest known proportions of Denisovan ancestry anywhere in the world — a legacy of interbreeding that occurred as modern humans moved through and beyond island Southeast Asia. The new evidence from Bianfu Cave suggests that the ways of life practised by Denisovans in this region — their hunting strategies, their flexible technological approaches, their hard-won knowledge of tropical and subtropical environments — may have been part of the inheritance, alongside their genes, that helped later human populations thrive as they spread across the diverse and challenging landscapes of Asia and the Pacific.

For palaeoanthropologists, the significance of the Bianfu Cave discoveries is difficult to overstate. Denisovans have been the least anatomically documented of all known hominin groups — a lineage defined first by DNA and only slowly fleshed out with fragmentary fossils. The new teeth, cranial fragments and radius from Yunnan, combined with an unmatched 120,000-year archaeological sequence, mean that researchers can finally study Denisovans not just as a genome or a set of molecular signatures but as a living, adapting population: hunters of large game, makers and users of expedient tools, and inhabitants of conifer forests that swung between glacial cold and interglacial warmth. As analysis of the Bianfu material continues, it promises to reshape our understanding of how archaic humans lived in eastern Asia and how deeply their story is woven into our own.

Subject of Research: Denisovan fossils and archaeological remains from Bianfu Cave, Yunnan Province, southwestern China, revealing Denisovan biology, technology, subsistence strategies and palaeoecology

Article Title: Denisovans from southwestern China and their subsistence strategies

Article References: Ruan, Q., Li, H., Xing, S., Zhao, K., Liu, J., Zanolli, C., Doyon, L., Delpiano, D., Peresani, M., d’Errico, F., Demeter, F., Hublin, J.-J., Xiao, P., Wang, Y., Jia, Z., Yang, Q., Fu, Q., Sun, Q., Zhao, Y., … Chen, F. (2026). Denisovans from southwestern China and their subsistence strategies. Nature. https://doi.org/10.1038/s41586-026-10997-4

Image Credits: AI Generated

DOI: 10.1038/s41586-026-10997-4

Keywords: Denisovans, Bianfu Cave, Yunnan, palaeoproteomics, enamel–dentine junction, Middle Pleistocene, subsistence strategies, expedient tool use, object affordance, specialized hunting, Marine Isotope Stages, Southeast Asia ancestry

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Research roundup: 7 cool science stories we almost missed

It’s a regrettable reality that there is never enough time to cover all the interesting scientific stories we come across. So every month, we highlight a handful of the best stories that nearly slipped through the cracks. August’s list includes the discovery of a new celestial object astronomers have dubbed a "black hole star"; breaking down plastics with microbes and turning them into edible cookies; how whale calls are connected to Einstein's special theory of relativity; and how avocado tree flowers switch sex during the day, among other highlights.

Discovery of a "black hole star"

Credit: Rohan Naidu (University of Hawai'i)

In 2024, astronomers combing through datasets taken by the James Webb Space Telescope noticed hundreds of mysterious little red dots lurking therein, believed to be baby quasars. They existed when the Universe was just a few hundred million years old. One such object in particular captured scientists' interest: a red dot that was extremely red and very bright, but whose properties didn't fit with any known astrophysical object. Astronomers have now concluded that the little red dot is a "black hole star," so named because it is the size of a large star but produces far more energy than would be possible via nuclear fusion—energy comparable to what an active black hole would produce.

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© ose-Luis Olivares, MIT

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Why did 1,000 world citizens bury their underpants?

A thousand people voluntarily buried their cotton underpants for two months—not to keep the Underpants Gnomes from stealing them, but as part of a citizen science project to map out soil health in 25 countries around the world. The results of this unique experiment were reported in a new paper published in the journal Plants People Planet.

“Our results show that how soil is managed can significantly affect both soil life and soil quality,” said co-author Marcel van der Heijden, an agroecologist at the University of Zurich. “Healthy, biologically active soil is crucial for fertility, nutrient cycling and many other ecosystem services.”

Soil health is critical for agriculture and, by extension, food security, not to mention a healthy global ecosystem, but it has been declining worldwide, per the authors. One key indicator of soil health is decomposition rates of complex organic matter, breaking down stuff like leaves, wood, even cadavers into simpler organic and inorganic compounds, releasing C02 and nutrients in the process. There have been relatively few large-scale national decomposition studies involving different land use types, although smaller studies have shown that how humans use a site can significantly affect the soil's biological diversity.

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© Nicolas Zonvi

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Is modern farming sustainable?

Since the 1850s, plowing and clear-cutting in modern agriculture have increased how fast soil erodes in the Upper Mississippi River Valley. Across the globe, farming strips soil up to 100 times faster than natural processes. It also removes farmable land and clogs waterways, threatening long-term environmental sustainability. However, scientists in the past have struggled to separate the effects of land-use changes from the transition out of the last ice age over the past 20,000 years. 

To determine whether current farming practices are sustainable, researchers from Minnesota recently measured the speed at which soil eroded during the ice age transition and compared it with modern agricultural erosion. They focused on the Trout Creek tributary of the Mississippi River. This tributary has 2 step-like formations, or terraces, on its bank that represent past floodplains before the river eroded to its current level. 

The oldest, upper terrace is about 14 meters (50 feet) above the lower terrace, which is about 8 meters (26 feet) above the modern floodplain. Scientists studying nearby areas have suggested that the terraces contain sediment from the last ice age, 20,000 years ago, referred to as the Last Glacial Maximum, to today. 

In the upper terrace, the researchers pushed an empty cylinder into the ground, like a straw into a layer cake, to collect a cylindrical sample of sediments about 4 centimeters (1.5 inches) wide and 6 meters (20 feet) deep, called a sediment core. They collected slices of this core from 2 meters (6 feet) and 6 meters (20 feet) to find the terrace’s age. 

Some grains in the sediment trap electrons while buried and release them when exposed to light. So the team shone light on the sediment slices to stimulate these electrons and measure the intensity of light emitted, known as their optically stimulated luminescence. Brighter light emissions indicate the sediment is older and was buried for a longer period of time. Using this method, they confirmed that the deep sediment slice was 22,000 years old, and the shallow sediment slice was 20,000 years old, dating the terrace back to the Last Glacial Maximum.

Next, the team drilled into the upper terrace with an auger to collect 25-centimeter (10-inch) wide plastic tubes of sediment. They pulled 4 samples from 0 to 2 meters (0 to 6 feet), and 1 sample from 6 meters (20 feet) deep. They explained that minerals in the sediment called quartz produce the radioactive form of the element beryllium, known as 10Be, when exposed to the Sun, so low 10Be means the sediment was buried quickly and had little sun exposure. The team measured the concentration of 10Be in each sediment sample and used an online calculator to estimate how quickly it eroded. The researchers calculated that during the Last Glacial Maximum, 0.073 millimeters (0.003 inches) of surface sediment were removed per year.

The researchers collected similar samples from the lower terrace and used optically stimulated luminescence to determine that it was between 22,000 and 14,000 years old. This terrace was the floodplain during the transition out of the Last Glacial Maximum, or deglacial period, where temperatures warmed and permafrost retreated. They measured the concentration of 10Be in samples from this terrace and determined that 0.049 millimeters (0.002 inches) of surface sediment were removed per year. 

Finally, the researchers measured 10Be in a sediment sample from the modern floodplain, deposited between 14,00 years ago and today. They found that the sediment had eroded 0.053 millimeters (0.002 inches) per year during that interval, at a rate slower than it had during the glacial period, but similar to the deglacial period. 

The researchers compared their findings to the average soil loss caused by modern agriculture, as reported by 4 previous scientists studying the area. They saw that modern farming removes an average of 0.60 millimeters (0.02 inches) of soil per year, which is 8 to 12 times greater than all the natural erosion rates they calculated. 

They concluded that the recent spike in soil loss from agriculture greatly exceeds that caused by the largest natural climate transition in recent Earth history. Human-driven erosion shows an upward “hockey stick” trend like the one seen in global temperatures, suggesting that similar trends could exist throughout Earth systems. The team concluded that modern agricultural practices aren’t currently sustainable. While measures like native plant reintroduction can help curb this trend, more research is required to determine how best to limit long-term erosion.

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Thawing permafrost is affecting fish health

Temperatures in the Arctic are increasing at a rate 4 times faster than the average global temperature. Scientists have documented the global effects of climate change, but there are still regions where these effects are less well known. This is the case for freshwater ecosystems in the Arctic.  

When the ground has been permanently frozen for 2 years, scientists call it permafrost. Permafrost contains soil, sand, rocks, and organic matter held together by ice. As temperatures rise, permafrost thaws, which can change groundwater flow paths. It can also alter a stream’s temperature, flow patterns, and nutrient loads by introducing new material from the permafrost.  

To determine how thawing permafrost affects Arctic ecosystems, scientists from the U.S. Geological Survey recently studied 10 headwater streams within the Brooks Range in the Noatak National Preserve of Alaska. The scientists studied streams with different amounts of permafrost and ice to test whether connections exist between permafrost, food webs, and populations of fish called the Dolly Varden and Arctic Graylings. They focused on these 2 species of fish because their migrations often indicate ecological shifts in the area.    

The scientists collected fish from the streams by temporarily stunning them, using a method called electrofishing, or by catching them in minnow traps. They manually identified each species they collected, then froze the fish and shipped them to a lab. Once in the lab, the scientists measured the length of each fish and used documented growth patterns to estimate its biomass. To calculate fish abundances, they divided their total biomass by the time spent electrofishing or trapping. Finally, they measured the energy density of each fish by burning it in a device called a bomb calorimeter. 

At each stream, the scientists took manual temperature measurements and deployed loggers that recorded the temperature every 15 minutes. They also deployed equipment at the bottom of each stream to record water pressure in 15-minute intervals and converted the data to depth, since pressure increases with depth. Then, they used wading rods to measure how much water was flowing through each stream at a given spot. 

They combined the depth and wading rod data to determine the flow rate of water in the streams over time. They used these data to identify unstable streams where water rose and fell rapidly. They also collected water samples from each stream and measured their nutrient concentrations, including dissolved organic carbon, nitrogen, and phosphorus, to determine water quality.   

Finally, they measured 2 types of smaller organisms that allow energy to flow through the food web to the fish, called microbial biofilms and macroinvertebrates. They used a hand-held device to estimate the types and amounts of biofilms, and nets to collect macroinvertebrates.

Once they had compiled these data, the team conducted a statistical analysis to compare the studied parameters and fish populations to the extent of permafrost in each area. They found that streams with more permafrost in the area had warmer temperatures, because the permafrost prevented water from infiltrating the soil to cool off. The streams with warmer temperatures, in turn, had lower abundances and biomass of Dolly Varden fish and Arctic Grayling with lower energy densities. They suggested that these results meant that the high temperatures had pushed the fish above their optimum temperature range. 

They also learned that the limited infiltration in permafrost areas caused rainfall to flow straight into the stream. This process created instability as the stream levels rose and fell rapidly. Fish in these unstable streams had lower energy densities, likely due to the harsher environment. 

Areas with greater permafrost also had higher concentrations of dissolved organic carbon and phosphorus, which stimulated the formation of biofilms at the bottom of the food chain. They noted that areas with more biofilms also had more macroinvertebrates and more Dolly Varden biomass. Since the Dolly Varden eats macroinvertebrates, this finding suggested that the lowest levels of the food web shape the health of species higher up. This is called the bottom-up effect, and means that areas with more biofilms and macroinvertebrates will likely have healthier and larger fish populations.  

The scientists explained that knowing how these factors influence Arctic fish populations can help researchers understand how thawing permafrost might affect Arctic ecosystems in the future. They anticipated that their data could help future researchers predict how these and other ecosystems will be impacted by changing landscape dynamics caused by global warming. 

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Are horseshoe crabs truly “living fossils”?

Horseshoe crabs are marine animals more closely related to spiders than crabs. These animals have existed for more than 450 million years, and are sometimes called “living fossils” because they appear to have changed very little throughout their evolutionary history. However, horseshoe crabs have a poor fossil record, so this apparent lack of change could also be due to a lack of evidence, particularly when it comes to their reproduction. Scientists want to know: Are horseshoe crabs truly living fossils?

Modern horseshoe crabs reproduce by releasing hundreds of eggs and sperm into tidal waters, via a process called external fertilization. Until now, scientists have assumed that horseshoe crabs have always reproduced this way. But paleontologists have only found 3 fossil horseshoe crabs from the past 252 million years with their reproductive systems preserved, so this assumption is mainly based on an absence of evidence to the contrary. 

Scientists in the past interpreted the horseshoe crab’s long history of external fertilization as indicative of its evolutionary consistency. However, James Lamsdell and colleagues recently discovered a new fossil species of horseshoe crab in the 450 million-year-old Big Hill Formation in Michigan that challenges this assumption. 

To study the specimen, the scientists photographed it under 2 types of microscopes. The first type of microscope used polarized light to see structures in the fossil that may have blended into the rock, like putting on special glasses to see subtle textures. The second type of microscope used fluorescent light to reveal soft tissue in the fossil. Only some tissues, like ovarian tissue and preserved eggs, glow under fluorescence, so this method helped the team rule out non-biological structures, like bubbles, cracks, or minerals. 

The researchers found that their analytical techniques revealed remarkable details about the ancient horseshoe crab. One unique feature of the fossil was the shape of its exoskeleton. The fossil’s exoskeleton had a more shovel-like appearance than that of modern horseshoe crabs, which are less elongated and more round. It was also about 11 times smaller than a modern adult horseshoe crab. 

The researchers also discovered that the fossil preserved an intricate network of ovaries containing unfertilized eggs. This ovarian network lined the interior surface of the shell in a band of interconnected tubes, preserving both unfertilized eggs and developing eggs. They noted that the fossil eggs were all about 0.1 to 0.15 millimeters in diameter, about the same width as a human hair. This size consistency suggested that all the eggs developed at the same time, via a process called synchronous development. 

Since the fossil crab’s ovarian tubes contained developing eggs, it was an adult, meaning that the earliest adult horseshoe crabs were significantly smaller and shaped differently than modern adult horseshoe crabs. Despite their differences in size and shape, the fossil horseshoe crab’s reproductive system closely mirrored its modern one, in terms of its ovarian system and synchronous development of eggs. As in previous studies, it showed no evidence of internal fertilization.

The researchers concluded that the earliest horseshoe crabs also reproduced through external fertilization. This fossil horseshoe crab is more than 215 million years older than preexisting fossils preserving evidence of external fertilization, and suggests that the horseshoe crab’s mode of reproduction has been conserved for almost half a billion years!

However, the team’s findings reveal a more nuanced evolutionary history for the horseshoe crab than previously assumed. Although they’ve maintained the same reproductive system for almost half a billion years, the size and shape of their exoskeleton have changed. This discovery reveals that different parts of the horseshoe crab evolved at different rates. It seems that horseshoe crabs are not entirely the living fossils scientists once thought… while their bodies have evolved, their reproduction has endured.

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