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Gene edit boosts rice safety while preserving high harvest yields

Cadmium (Cd) contamination is a growing threat to food safety, and rice is one of the most vulnerable crops. Because rice plants can accumulate cadmium from contaminated soils more readily than many other staples, Cd can become a major dietary exposure route for large parts of the world’s population. Yet attempts to lower cadmium often create trade-offs—reducing uptake of essential nutrients or weakening plant performance.

A new study from Okayama University, Japan, and collaborating researchers in China reports a precision-editing strategy designed to avoid those trade-offs. The team focused on the rice metal transporter gene OsNramp5, which is known to move metals such as manganese and cadmium, and used base-editing to search for a beneficial point mutation within the gene rather than disabling it.

Using adenine and cytosine base editors, the researchers generated more than 1,600 genome-edited rice lines and screened them for reduced cadmium accumulation. Their saturation mutagenesis approach targeted OsNramp5 to identify variants that kept normal plant physiology while limiting Cd buildup in grain.

The key breakthrough was the I441T substitution: changing isoleucine to threonine at amino acid position 441. This single change reduced cadmium levels in both shoots and brown rice without altering gene expression, protein abundance, or the subcellular localization of the transporter.

Importantly, the mutation did not come at the cost of micronutrients. Field trials on cadmium-contaminated soil showed a 48% decrease in cadmium concentration in brown rice, from 0.14 mg/kg in wild type to 0.07 mg/kg in the edited plants, while iron, manganese, and zinc levels remained essentially unchanged.

The researchers then explored the mechanism behind the selective effect. Although OsNramp5 transports multiple metals, the I441T mutation shifted its selectivity—enhancing zinc transport preference. Increased zinc accumulation in root cells promoted competitive inhibition against cadmium during root-to-shoot movement.

Instead of completely blocking cadmium uptake, the edited transporter selectively limited cadmium translocation, reducing grain contamination while preserving essential mineral delivery. The team supported these conclusions with physiological assessments, gene and protein analyses, yeast transport assays, and agronomic evaluation.

Overall, the work demonstrates how precision genome editing can address a long-standing breeding challenge: lowering toxic metal accumulation without disrupting nutrient homeostasis. The researchers propose that the OsNramp5I441T allele could accelerate development of safer rice varieties for mildly contaminated regions.

Subject of Research: Not applicable
Article Title: Genome-edited rice variety with low-cadmium accumulation in the grain
News Publication Date: 18-Jun-2026
Web References: http://dx.doi.org/10.1073/pnas.2610609123
References: DOI: 10.1073/pnas.2610609123 (Proceedings of the National Academy of Sciences)
Image Credits: Credit: Professor Jian Feng Ma from Okayama University, Japan

Keywords: cadmium, rice, OsNramp5, base editing, genome editing, metal transporters, food safety, micronutrients, zinc competition, plant breeding

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Nearly half of South Korea’s roughly 51 million citizens share just four family names — Kim (about 21.5 percent of the population), Lee (14.7 percent), Park (8.4 percent) and Choi (4.7 percent) — a legacy of the country’s history: commoners were only formally granted surnames within the last 150 years, and many took those already held by nobility

In South Korea’s 2015 census, one in five people was named Kim: 21.5 percent of the population, or 10.69 million people. Next came Lee at 14.7 percent, Park at 8.4 percent and Choi at 4.7 percent. Add those four together and you approach half a country of roughly 51 million. Stretch the list to the ten most common surnames and you cover 63.9 percent of everyone, barely down from 64.1 percent in 2000.

Picture that in a Seoul subway carriage. A dozen people named Kim might be sitting together, none of them related. So why does a country of tens of millions run on such a short list of names?

The answer sits mostly in the last two centuries of Korean history.

Why the pool of names is so small

For most of the Joseon dynasty, a surname was a sign of rank, not something everyone had. Family names belonged to the yangban, the aristocracy. Commoners and enslaved people generally had none. The story of Korea’s few surnames is really the story of how everyone below the aristocracy eventually got one, and which names they reached for.

The spread began long before any law required it. A study of one prefecture’s census records, reported by Moon Ki-hoon in The Korea Herald, found that the share of local households without a surname fell from 45 percent in 1681 to just 6 percent in 1816.

The 1894 turning point and the rush to noble names

The legal end of the class system came with the Gabo Reform of 1894. When surnames finally became universal, the people newly free to choose one tended to pick from a small set of high-status clans. Kim, Lee and Park were the obvious picks, and for a clear reason.

Andrew Eungi Kim, a professor at Korea University’s Graduate School of International Studies, told ESPN that “those names were the most prestigious for having produced large numbers of kings, royalties and other historically significant figures.” In a society where family line shaped your opportunities, choosing such a name carried real weight. The top three surnames now cover 44.6 percent of the population, a share that has barely moved since the Joseon era.

Once taken, those names held firm. Yumi Moon, a historian of East Asia at Stanford University, explained the taboo against dropping an inherited name: “Changing your surname [which is] inherited from your ancestors is disgraceful, according to the custom of the olden.” A name chosen for advantage in one generation became, in the next, an ancestral inheritance nobody would think to change.

Living with a short list of names

So many shared names creates practical problems, and Koreans built a workaround into the system: the bon-gwan, or ancestral seat. Two people can both be named Kim yet belong to completely separate clans, each traced to a different founding region. The largest, the Gimhae Kim clan, has around 4 million members, with the Gyeongju Kim adding roughly 1.5 million more.

That distinction once mattered in law. An old rule banned marriage between two people who shared both a surname and an ancestral seat. In practice, millions of unrelated Gimhae Kim could not marry one another. The Constitutional Court ruled the ban unconstitutional on 16 July 1997. A revised Civil Code, narrowing the ban to close blood relatives, took effect on 31 March 2005.

Custom has proved harder to shift than law. Kim Beom-jun, a professor at Sungkyunkwan University, notes that “In Korea, the Confucian tradition still runs deep with people, an example of which is the practice of not allowing their children to use different surnames from those of their fathers.” He does not expect the mix to change: “I don’t think there will be many changes in the portions of family names in the future, either,” he said.

There is one quiet source of new variety. The 2015 census recorded 5,582 distinct surnames, more than 4,800 of them newly registered since 2000. Most came from naturalised citizens writing foreign names into Hangul. The list is growing at the edges even as its centre holds. Whether a handful of clans can keep anchoring the identity of a slowly diversifying country is the open question the census leaves behind. 

The post Nearly half of South Korea’s roughly 51 million citizens share just four family names — Kim (about 21.5 percent of the population), Lee (14.7 percent), Park (8.4 percent) and Choi (4.7 percent) — a legacy of the country’s history: commoners were only formally granted surnames within the last 150 years, and many took those already held by nobility appeared first on Space Daily.

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Engineer identifies and explains every '90s computer seen in Jurassic Park

Jurassic Park, while beloved as a film, has been the subject of snarky memes for the infamous line in which one of the characters declares, "This is a Unix system, I know this!" while using a computer with an unusual 3D file manager interface.

Despite the memes, the film's production team was meticulous in accurately sourcing the right PCs (and adjacent details) for the sets—not too much of a surprise, given writer Michael Crichton's background with computing and his obsessive attention to detail in the book the film is based on.

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Engineer identifies and explains every '90s computer seen in Jurassic Park

Jurassic Park, while beloved as a film, has been the subject of snarky memes for the infamous line in which one of the characters declares, "This is a Unix system, I know this!" while using a computer with an unusual 3D file manager interface.

Despite the memes, the film's production team was meticulous in accurately sourcing the right PCs (and adjacent details) for the sets—not too much of a surprise, given writer Michael Crichton's background with computing and his obsessive attention to detail in the book the film is based on.

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In memoriam: 7 of our favorite Sam Neill films

New Zealand actor Sam Neill, who starred as Dr. Alan Grant in the 1993 blockbuster Jurassic Park and its 2022 sequel, Jurassic World Dominion, died on Monday in Sydney, Australia. He was 78.

While American audiences likely know Neill best for Jurassic Park, he had a long and varied career in film and television. His sheer versatility won him fans around the world. He played the grown Damien in Omen III: The Final Conflict; a Russian officer in The Hunt for Red October; and even made brief cameos (as an actor playing Odin in a theatrical troupe) in Thor: Ragnarok and Thor: Love and Thunder. (The less said about 1997's space horror travesty, Event Horizon, the better, although it has its fans, and Neill made the most of his role.) Yet some of his best performances were in smaller, critically acclaimed independent films such as 1993's Oscar-winning The Piano.

On television, Neill earned his first Golden Globe nomination for the lead role in Reilly, Ace of Spies in the 1980s. He was nominated for both an Emmy and a second Golden Globe for playing the titular Arthurian wizard in the 1998 miniseries Merlin. He played Cardinal Wolsley in The Tudors, and was part of the ensemble cast in the (excellent) 2015 adaptation of Agatha Christie's And Then There Were None. Neill was magnetic as the ruthless CI Major Chester Campbell in Peaky Blinders—an antagonist and romantic rival of Cillian Murphy's Tommy Shelby.

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Rothéneuf : comment 300 visages sculptés dans la falaise ont créé l’un des sites les plus mystérieux de France

À quelques kilomètres de Saint-Malo, les rochers de Rothéneuf abritent plus de 300 visages, monstres et corsaires figés dans le granit. Œuvre monumentale de l’abbé Fouéré, ce site sculpté à même la falaise intrigue autant qu’il fascine, entre légende locale et énigme artistique. Un lieu unique...

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2000-Year-Old Evidence of a Cult Shrine to Odysseus, the Legendary Hero of Homer’s ‘Odyssey,’ Has Been Uncovered at Ithaca  

As Christopher Nolan’s The Odyssey arrives in theaters, archaeologists working off the western coast of Greece say a real-life cult site devoted to the legendary story’s hero has been uncovered.

Local traditions had long told of a stony hilltop on the Greek island of Ithaca that had once been home to a shrine to Odysseus, the legendary Greek king of the isle and main protagonist in Homer’s famous poem.

Now, after close to two decades of archaeological work on the island that served as home to the fictional king in Homer’s epic literature, archaeologists say they have uncovered the most compelling evidence yet that a genuine historical cult site had existed there, dedicated to the famed hero of The Odyssey.

An Ancient Cult Site Devoted to Odysseus

Researchers with the University of Ioannina recently revealed the discovery of new inscriptions and artifacts supporting the existence of a cult element devoted to Odysseus, uncovered at the ancient complex at Agios Athanasios, which had been a public sanctuary devoted to the worship of Homer’s famous hero during the Hellenistic and early Roman periods.

According to a statement released by the Greek Ministry of Culture, the building complex is characterized by a series of robust structures located on terraces, which involve several monumental elements featuring carved architecture and niches for what appear to have been votive offerings or inscriptions, all of which point to its use as a cult site.

Yannos Lolos, one of the project’s lead archaeologists, recently told ArtNet that the site’s role was revealed partially through a reexamination of existing materials found there, which helped reveal what he calls “new and strong inscriptional evidence” linking the site to Odysseus.

Bronze Bust and Inscription Discoveries

Among the most important discoveries at the site were a small bronze bust of Odysseus dating to the first or second century C.E., as well as a roof tile fragment which bore an inscription that reads, “to Odysseus.”

However, an even more compelling discovery involved a second stamped roof tile inscribed with the hero’s name but appearing in the Greek genitive case; this is significant, since it indicates ownership, thereby identifying the sanctuary as “belonging” to Odysseus.

cult of Odysseus
A close-up image depicting the tile recovered from the site, bearing an inscription that references Homer’s Odysseus (Image Credit: Greek Ministry of Culture).

Based on current evidence, organized cult worship is believed to have begun at the site by around the late fourth century B.C.E., which places its use at around 500 years after Homer composed his famous epic poem, and almost a full millennium after the legendary events the epic describes.

The physical sanctuary itself was built onto a massive natural rock formation, and remnants of the ancient structure include a primary tower, a large oblong building, and terraces which were carved directly into the underlying bedrock.

Excavations over the last several years have also revealed the site’s deeper history, which points to evidence of earlier Mycenaean occupation during the 13th and 14th centuries B.C.E., at which time the site had likely served as a strategic center overseeing nearby harbors and local water resources.

A Discovery with Legendary Significance

In a statement, the Greek Ministry of Culture said the two new engravings arrives “in combination with the other available data, to document the development of a prominent public complex at the site,” which it said help to establish the “major role in the religious, social and possibly political life of the Ithacians of the Hellenistic-early Roman periods, but also with a broader pilgrimage character.”

The recognition of this ancient cult site only adds to the existing evidence that already supported worship of Odysseus on Ithaca. Past discoveries have revealed ancient coins depicting the hero, found near ritual offerings at Ithaca, which were also linked to cult activities. However, the identification of the sanctuary offers the most conclusive archaeological evidence to date that Homer’s legendary hero had been the cult’s focus.

Of course, these discoveries fall short of establishing Odysseus as a true historical figure, and most scholars agree that Odysseus was a fictional character born out of traditions that incorporated real places and events into their broader mythos.

However, in at least a few instances, the lines between myth and ancient history have been blurred—a famous example being Heinrich Schliemann’s identification of a site (originally discovered by British amateur archaeologist Frank Calvert, with his identification of the mound of Hisarlik) which helped reveal the archaeological reality behind the city of Troy, which had previously been considered a mythical location.

It was also reported last year that an archaeological discovery resembling the “labyrinth” from Greek mythology had been uncovered on Crete, in a discovery some have called “one of the most important archaeological finds” of the century.

Although the discoveries at Ithaca don’t establish Homer’s Odysseus as a historical figure in this way, they do confirm that centuries after The Odyssey was composed, inhabitants of Ithaca engaged in cult activities to honor the legendary king at a sanctuary on the island, which, according to legend, he once ruled.

Additional details about the site and discoveries made there in recent years can be found at the Greek Ministry of Culture website.

Micah Hanks is the Editor-in-Chief and Co-Founder of The Debrief. A longtime reporter on science, defense, and technology with a focus on space and astronomy, he can be reached at micah@thedebrief.org. Follow him on X @MicahHanks, and at micahhanks.com.

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George Lucas likens AI sceptics to luddites clinging to horses and carts

Star Wars director calls AI technology ‘the future’ of film-making and says ‘there’s nothing you can do about it’

The Star Wars director, George Lucas, has added his voice to the growing chorus of film-makers receptive to the rising use of AI tools in moviemaking.

Speaking in an interview with A Rabbit’s Foot, Lucas, 82, said: “Artificial intelligence means it’s much easier for us to make movies.”

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© Photograph: Angela Weiss/AFP/Getty Images

© Photograph: Angela Weiss/AFP/Getty Images

© Photograph: Angela Weiss/AFP/Getty Images

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Zombies, gore and creepy kids – why we can’t stop playing horror games

As global anxieties multiply, ​v​ideo games from Resident Evil to Mouthwashing are providing rich source material to help decode society’s problems

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Horror is so hot right now. There’s Obsession, Evil Dead Burn and Hokum in the cinema, Widow’s Bay, From and Something Very Bad Is Going to Happen on TV, and, of course, a rotting smorgasbord of horror games including Resident Evil Requiem (pictured top) and Reanimal, soon to be joined by Silent Hill: Townfall, Silver Pines and Dreadmoor. We’re also seeing weird cross-pollinations, with horror movie studio Blumhouse making games, while games themselves become horror films and the whole backrooms genre infects every medium it touches.

So it was fascinating to attend last week’s horror and gaming conference at Falmouth University, in Cornwall: a gathering of students, researchers and lecturers, all engaged in the academic study of horror games. There were brilliant talks on zombies and posthumanism, the gothic in games, and the role of monstrous little girls in survival horror (there are a lot of them!). Subjects as diverse as masculine fragility, disability and ageing came up; Will Doyle, creative director at Supermassive Games, gave a great keynote on the art of creating horror in games using tools such as revulsion, spatial alienation and the human instinct of apophenia. I learned a lot about theorists such as Julia Kristeva and Mark Fisher, and about the technical similarities between indie horror games and film noir (for example, the use of darkness and creative camera techniques to “hide” budget restrictions). It was incredible fun.

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© Photograph: Capcom

© Photograph: Capcom

© Photograph: Capcom

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Book publishers sue Google for copyright infringement over Gemini AI training

Group of major publishers accuses the tech giant of ‘one of the most prolific infringements of copyrighted materials in history’

A group of major publishers have filed a lawsuit against Google, accusing the company of illegally using millions of copyrighted books to help build its Gemini artificial intelligence models, in “one of the most prolific infringements of copyrighted materials in history”.

The case, filed in federal court in New York, has been brought by three publishers – Hachette Book Group, Cengage Learning, and Elsevier – and bestselling American author Scott Turow.

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© Photograph: Bloomberg/Getty Images

© Photograph: Bloomberg/Getty Images

© Photograph: Bloomberg/Getty Images

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The Uncontacted: Living in Voluntary Isolation, These Are the People Governments Pretended Didn’t Exist

Deep within the world’s remaining equatorial forests, the last uncontacted Indigenous peoples continue to live in near-total isolation. They represent humanity’s final societies that have consciously chosen to remain beyond the reach of the modern world. Their existence is extraordinary not only because of who they are, but because of what their survival reveals about ourselves.

For decades, however, governments found it politically and economically convenient to pretend that many of these people did not exist.

That chapter is, thankfully, drawing to a close. Today, Peru, Brazil, and other South American nations officially recognize the existence of Indigenous peoples living in voluntary isolation. Yet the history of denying their existence remains one of the most revealing episodes in the modern relationship between development, politics, and human rights. It reminds us that before forests are exploited, the people living within them are often rendered politically invisible.

The lesson extends far beyond the Amazon.

Throughout history, governments have rarely denied the existence of people simply because evidence was lacking. In colonial times, the existence of indigenous societies and cultures had no bearing on European immigrant expansion. Their cultures were considered primitive, and civility and religion would be the great benefits of settler expansion. In the 20th and 21st centuries, denial served a more practical purpose. If no one officially occupied a forest, there were no communities whose rights required protection. No Indigenous reserves needed to be established. Logging concessions could be issued, roads extended, mines approved, and oil exploration expanded with fewer legal obstacles. Recognition would carry consequences.

Once governments acknowledge uncontacted peoples, they assume obligations under national constitutions, international human rights law, the United Nations Declaration on the Rights of Indigenous Peoples (UNDRIP), and, in many countries, ILO Convention 169. Suddenly, economic development must coexist with human rights.

For years, this tension played out repeatedly in the Peruvian Amazon.

As proposals emerged to establish reserves for Indigenous peoples living in voluntary isolation, regional politicians and government officials questioned whether these communities existed at all. They argued there was insufficient evidence despite decades of documentation by anthropologists, Indigenous organizations, and conservation scientists. Shelters, cultivated gardens, footprints, arrows, abandoned camps, aerial observations, and repeated eyewitness accounts painted an increasingly compelling picture. Yet recognition often lagged precisely where logging, oil, gas, or mining interests sought access.

In retrospect, this was never simply an anthropological debate. It was an economic one.

The existence of uncontacted peoples transformed forests from potential commercial assets into protected Indigenous territories. Recognition restricted extraction. Denial facilitated it.

Fortunately, much of that official denial has now ended. Governments increasingly recognize that uncontacted peoples do exist and deserve legal protection. Yet the episode leaves behind an important lesson: political narratives often reflect competing economic interests as much as objective evidence. The question is no longer whether uncontacted peoples exist. The question is whether governments possess the political will to protect them.

The irony is profound. The same territories that some once wished to portray as empty are now recognized as among the most important ecosystems on Earth.

Study after study demonstrates that Indigenous territories, particularly those occupied by peoples living in voluntary isolation, experience significantly lower rates of deforestation than surrounding forests. These landscapes contain extraordinary biodiversity, protect countless species yet to be documented by science, regulate regional rainfall, and store immense quantities of carbon essential to moderating global climate change.

Protecting uncontacted peoples, therefore, serves two inseparable purposes.

It safeguards fundamental human rights while simultaneously protecting some of humanity’s greatest environmental assets. In the western Amazon, where I have spent time working, these realities become impossible to separate.

This region contains the greatest concentration of uncontacted peoples anywhere on Earth. It is also among the richest expressions of biological diversity on the planet. Yet it remains under relentless pressure from illegal logging, mining, expanding road networks, narcotics trafficking, and land speculation. While Peru and Brazil have established large protected Indigenous territories, enforcement has weakened in many areas as criminal organizations and commercial interests increasingly penetrate previously inaccessible forests.

Every encounter between outsiders and uncontacted peoples carries enormous risk.

Centuries of violence, exploitation, and disease can be compressed into a single unexpected meeting. Illegal miners, loggers, and land invaders increasingly enter territories occupied by isolated peoples, provoking confrontations that neither side seeks. Fatal encounters have occurred involving both Indigenous defenders protecting their ancestral lands and outsiders venturing into territories they had no right to enter.

I experienced something that profoundly altered my appreciation of this reality.

On a recent expedition, I awoke before dawn to a river wrapped in mist beneath a pale orange sky. Overnight storms had left the air heavy with humidity as I walked along a stretch of exposed sand. Through the haze stood a man. Barely clothed, carrying what appeared to be a weapon of some form, he remained motionless for only a few seconds before silently disappearing back into the forest.

The encounter was brief, but penetrating. Ten thousand years faded away.

We were outside any officially protected Indigenous territory and had taken every precaution to avoid contact. Yet there he was, undeniably real. His footprints remained impressed in the wet sand long after he disappeared.

They reminded me that debates over whether isolated peoples exist are ultimately settled not by ideology, but by reality itself. These communities continue to live within forests that many outsiders still view primarily through the lens of economic opportunity.

Throughout the Americas, first contact repeatedly brought catastrophic epidemics, displacement, exploitation, and cultural destruction. Peoples living in voluntary isolation possess little immunity to common infectious diseases carried unknowingly by outsiders. Even a well-intentioned contact can prove devastating.

Some argue that continued isolation is no longer realistic—that climate change, expanding infrastructure, and globalization make eventual integration inevitable.

I believe this misunderstands both ethics and history.

It assumes that outside society possesses the right to determine other people’s future. It repeats the paternalism that has accompanied Indigenous dispossession for centuries. Respect requires something more difficult. It requires restraint.

The greatest lesson we should draw from the period when governments denied the existence of uncontacted peoples is not simply that denial was wrong. It is that economic convenience can shape political reality in dangerous ways. When forests are viewed primarily as timber, minerals, or agricultural land, it becomes remarkably easy to overlook the people who stand in the way of exploitation.

Today, official denial has largely given way to official recognition.  That represents genuine progress. But recognition alone is insufficient if protections exist only on paper while illegal logging, mining, and organized crime continue to erode Indigenous territories on the ground.

Over the years, I have seen echoes of this same struggle elsewhere. In the highlands of Papua New Guinea, where stone tools were still in use, communities sought to preserve traditions against an advancing modern world. On India’s Andaman Islands, members of the Jarawa halted a military convoy I was travelling with, bows drawn, defending the integrity of their homeland. Across continents, the underlying question remains remarkably consistent: can modern societies respect the right of other cultures not to become like us?

The uncontacted peoples of this world challenge our assumptions about progress itself. Their existence reminds us that development is not the only measure of a society, and that autonomy sometimes means choosing a different path altogether.

Their territories also remind us that some of the world’s most effective conservationists have never described themselves as environmentalists. By simply defending their lives and territory, they have preserved ecosystems that benefit every person on Earth.

The people governments once pretended did not exist have become some of the planet’s important guardians. Protecting them is no longer only about correcting historical injustice. It is about recognizing that human rights, biodiversity, and climate stability are inseparable. Their silence in the forest is not absence. It is sovereignty.

Yet the story of the uncontacted has another, profound consideration for our era that extends far beyond remote forests. The history of the uncontacted tells us that for years, some governments denied the existence of people who were demonstrably there because acknowledging them carried political and economic costs. As we search for life beyond Earth, humility demands that we distinguish between what has not yet been confirmed and what may simply remain beyond our present ability—or willingness—to acknowledge.

History repeatedly warns against confusing the limits of our knowledge with the limits of reality.

Kerry Bowman, PhD, is a Canadian bioethicist and environmentalist. An instructor at the University of Toronto, he currently holds an academic appointment in the Faculty of Medicine and School of the Environment.  Bowman’s recent work includes two major conservation projects in the Western Amazon and the Eastern Congo, focusing on the intersection of human health with factors such as deforestation, biodiversity loss, and emerging zoonotic diseases.

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D-topia review – cosy sci-fi mystery takes aim at AI

PC, PS5, Xbox Series X/S, Nintendo Switch, Nintendo Switch 2; Marimittu Games
A soft puzzle game makes a sharp point about the over-optimised future ahead

In the far future, on a planet that is not Earth, AI is in charge. This entity is no Skynet-esque killer robot but a machine that cares for humanity. Manifesting most visibly as cute droids, the technology is pervasive – embedded in everything from the design of the sleek architecture to the gorgeous, mostly sunny artificial weather. The so-called Optimization System has but one responsibility: ensuring the greatest happiness for the greatest number of people.

In less skilled hands this game might have felt like an undergraduate seminar on the limits of utilitarianism. But Japanese studio Marumittu Games elegantly marries its philosophical concerns with smart design choices. You play as a young, unnamed Facilitator tasked with tending to both the city’s bots and its human residents. Each morning you wake up, sleepily loping off to the bathroom before sitting down for an exquisitely rendered breakfast, and then embark on your day’s work. Like everything else in this near-future scenario, labour is designed to cause as little frustration as possible, amounting to simple maths brain teasers on a grid – nothing too taxing, but enough to keep you engaged.

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© Photograph: Annapurna Interactive

© Photograph: Annapurna Interactive

© Photograph: Annapurna Interactive

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Synthetic Sincerity review – Marc Isaacs’ AI interrogation grapples with identity and existence

A combination of fact and fiction leaves the celebrated documentarian’s puzzling project about software training wanting for depth

Marc Isaacs’ new film is a curious, intriguing, semi-sincere affair that I couldn’t make friends with. It is an odd, shallow piece of work about artificial intelligence that is itself exasperatingly artificial, a self-aware docudrama hybrid. Isaacs is, or rather pretends to be, licensing the vivid characters from his previous, acclaimed documentaries to a fictional AI research lab called Synthetic Sincerity at the fictional University of Southern England, so that the lab’s software can be “trained” in the creation of AI human figures on screen.

The lab’s research staff are played by actors, or at any rate people acting; these include Lebanese independent film-maker Lynn El Safah. Isaacs has amusing scripted conversations about this project with a disapproving AI avatar on screen, like Max Headroom of old, whose face is digitally modelled on Romanian actor Ilinca Manolache, from Radu Jude’s Do Not Expect Too Much from the End of the World. The film, however, does not show the process by which Manolache was approached and her face transformed into an AI figure.

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© Photograph: PR

© Photograph: PR

© Photograph: PR

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Viruses help plants obtain nitrogen

Nitrogen is an essential building block of proteins, amino acids, and DNA. Without nitrogen, cells can’t function or reproduce. Nitrogen is abundant in the atmosphere as dinitrogen gas, but plants and animals can’t access atmospheric nitrogen. Instead, we rely on biologically available forms like ammonia and nitrate. 

Specialized microbes can transform atmospheric nitrogen into ammonia via a process called biological nitrogen fixation. Nitrogen-fixing soil bacteria have a unique protein complex, the nitrogenase complex, that facilitates this nitrogen transformation. The nitrogenase complex is activated by a group of genes known as nif genes. 

Legume plants like peanuts, peas, and beans have nitrogen-fixing bacteria in the soil zone around their roots, called the rhizosphere. The symbiotic relationship between nitrogen-fixing soil bacteria and legume plants supplies most of the biologically available nitrogen to life on Earth.

Bacteria attached to plant roots “feed” nitrogen to plants through the soil, and in turn receive organic acids for energy from plants performing photosynthesis. Source: Wikimedia Commons

Bacteria attached to plant roots “feed” nitrogen to plants through the soil, and in turn receive organic acids for energy from plants performing photosynthesis. Source: Wikimedia Commons

However, one piece of the puzzle remains unexplored: the role of soil viruses in these nitrogen transformations, referred to as the nitrogen cycle. Viruses are microscopic particles made up of genetic material and proteins, but they can’t reproduce without a host cell. Scientists consider viruses to be biological entities that are halfway between living and non-living.

To reproduce, viruses contact a host cell and inject their genetic material into it. The virus’s genetic material takes over the host cell’s genome and forces the cell to produce proteins that assemble into new viruses. As new viruses are created, they can incorporate genes from the host cell into their own genetic material. Genes that are transferred from a host cell to a virus are known as auxiliary metabolic genes (AMGs). Viruses can carry AMGs and pass them to other hosts or use them to increase their own ecological fitness. 

Scientists from China, Spain, and the Czech Republic set out to investigate whether viruses from legume roots could increase local soil nitrogen fixation by expressing nif AMGs or by transferring nif genes to other bacteria. First, they determined the global distribution of viral nitrogen-fixing genes by analyzing about 8.6 million viral genomes from the Integrated Microbial Genomes/Virus database. They looked for the DNA sequences of known nitrogen-fixing genes and the locations where the viruses were sampled. They found that only 0.003% of the viruses in the database had at least 1 nitrogen-fixing gene, but they clustered in the same locations as nitrogen-fixing bacteria. 

The team also found 3 types of viruses that most commonly carried nitrogen-fixing genes: Kyanoviridae, Nudiviridae, and Bronfenbrennervirinae. Kyanoviridae viruses carried a nif gene called nifU. The researchers used a computer program called DRAM-v to confirm that nifU was a fully functional gene and a real tool that viruses could use. 

Next, the team collected soil samples from a cowpea field in Nanjing, China, to test whether the cowpea roots influenced the abundance of viruses using nitrogen-fixing genes. They collected soil from the cowpea rhizospheres and soil away from the plants. They analyzed both viral and bacterial RNA in the soil samples to identify active genes, using a sequencing process called metatranscriptomics. They found that the viral nifU gene was actively expressed in the cowpea rhizosphere samples more than in the non-crop soil. Although about 96% of nifU genes were being expressed by bacteria, viruses contributed about 4%. 

The researchers then assessed whether rhizospheric viruses changed the amount of nitrogen being fixed in these soils. They set up small, enclosed containers of sterile soil and added either bacteria or a mixture of bacteria and viruses extracted from the cowpea rhizospheres. They found that soil with viruses had higher total nitrogen (36 milligrams per kilogram, or mg/kg) than soil without viruses (17 mg/kg). 

Finally, they adjusted the air in each container to have a different form of dinitrogen gas. Atoms of the same element that have different atomic masses are known as isotopes. Nitrogen has 2 stable isotopes: lighter nitrogen-14 and heavier nitrogen-15. Bacteria or viruses that fix nitrogen at natural isotope abundances will take up nitrogen-14. But scientists can track who in the population fixes nitrogen by adding nitrogen-15 to the air, a process called nitrogen-15 stable isotope probing. Nitrogen-fixers will incorporate the heavy nitrogen-15 into their biomass over time and increase their weight, allowing researchers to separate and identify them.

The team grew the bacteria and viruses with nitrogen-15 for 35 days, then used stable isotope probing to separate the nitrogen fixers. They detected viral nifU AMGs among the heavier biomass, confirming that rhizospheric viruses were fixing nitrogen. 

The team concluded that rhizospheric viruses and the viral nifU AMG can increase nitrogen fixation in cowpea soils. The team suggested that although viruses with nitrogen-fixing genes are rare, they can influence the soil nitrogen cycle. They recommended that future researchers further test the contribution of viral nifU genes to plant nitrogen fixation with controlled infection experiments.

The post Viruses help plants obtain nitrogen appeared first on Sciworthy.

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The real mystery behind Moana: After 1,700 years, why did Polynesians suddenly sail east?

The same question drives both the plot of Moana and decades of archaeological research: Why, after centuries of relative stability, did Polynesian voyagers suddenly begin settling islands thousands of kilometers away across the Pacific?

The latest Moana movie is a live-action adaptation of a Disney animated movie of the same name. While the films are fictional, they draw inspiration from the rich seafaring heritage of Polynesian peoples, whose ancestors undertook one of the greatest episodes of maritime exploration in human history.

New climate evidence may help us understand why they embarked on these voyages.

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When the Sky Booms and Drivers Swerve: The Strange Road Hazards Nobody Plans For

Ask someone to picture a car crash, and you get the standard cast: a distracted driver, a slick road, a red light run at the wrong second. Some of the strangest wrecks start somewhere else entirely. They start in the sky. A boom nobody can source. A flash on the horizon followed by a low […]

The post When the Sky Booms and Drivers Swerve: The Strange Road Hazards Nobody Plans For appeared first on Strange Sounds.

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